fastDNAml is an attempt to solve the same pr oblem as DNAML. but to do so faster and using less memory, so that larger trees and/or more bootstrap repl icates become tractable. Much of fastDNAml is m erely a recoding of the program resistant 3.3 DNAML from PASCAL to C.

Packet : 109201241fastdnaml_1.2.2p.rar filelist
fastDNAml_1.2.2p\docs\fastDNAml_doc_1.2.txt
fastDNAml_1.2.2p\docs\fastDNAml_doc_1.2p.txt
fastDNAml_1.2.2p\docs\fastDNAml_scripts.txt
fastDNAml_1.2.2p\docs
fastDNAml_1.2.2p\GNU_GENERAL_PUBLIC_LICENSE
fastDNAml_1.2.2p\license
fastDNAml_1.2.2p\scripts\ae2dnaml
fastDNAml_1.2.2p\scripts\bootstrap
fastDNAml_1.2.2p\scripts\categories
fastDNAml_1.2.2p\scripts\categories_file
fastDNAml_1.2.2p\scripts\checkpoint_summary
fastDNAml_1.2.2p\scripts\clean_checkpoints
fastDNAml_1.2.2p\scripts\clean_jumbles
fastDNAml_1.2.2p\scripts\dnaml_progress
fastDNAml_1.2.2p\scripts\fastDNAml_boot
fastDNAml_1.2.2p\scripts\fastDNAml_loop
fastDNAml_1.2.2p\scripts\frequencies
fastDNAml_1.2.2p\scripts\global
fastDNAml_1.2.2p\scripts\iterate_rates
fastDNAml_1.2.2p\scripts\jumble
fastDNAml_1.2.2p\scripts\min_info
fastDNAml_1.2.2p\scripts\n_categories
fastDNAml_1.2.2p\scripts\n_files
fastDNAml_1.2.2p\scripts\out.PID
fastDNAml_1.2.2p\scripts\outgroup
fastDNAml_1.2.2p\scripts\printdata
fastDNAml_1.2.2p\scripts\quickadd
fastDNAml_1.2.2p\scripts\restart
fastDNAml_1.2.2p\scripts\scores
fastDNAml_1.2.2p\scripts\transition
fastDNAml_1.2.2p\scripts\treefile
fastDNAml_1.2.2p\scripts\treefile2prolog
fastDNAml_1.2.2p\scripts\trees2NEXUS
fastDNAml_1.2.2p\scripts\trees2prolog
fastDNAml_1.2.2p\scripts\userlengths
fastDNAml_1.2.2p\scripts\usertree
fastDNAml_1.2.2p\scripts\usertrees
fastDNAml_1.2.2p\scripts\weights
fastDNAml_1.2.2p\scripts\weights_categories
fastDNAml_1.2.2p\scripts
fastDNAml_1.2.2p\src\addElementLen.c
fastDNAml_1.2.2p\src\best_tree.c
fastDNAml_1.2.2p\src\cmon.c
fastDNAml_1.2.2p\src\comm_mpi.c
fastDNAml_1.2.2p\src\comm_pvm.c
fastDNAml_1.2.2p\src\comm_seq.c
fastDNAml_1.2.2p\src\dnaml_mon.c
fastDNAml_1.2.2p\src\fastDNAml.c
fastDNAml_1.2.2p\src\fastDNAml_funcs.h
fastDNAml_1.2.2p\src\fastDNAml_globals.h
fastDNAml_1.2.2p\src\fastDNAml_types.h
fastDNAml_1.2.2p\src\file_util.c
fastDNAml_1.2.2p\src\foreman.c
fastDNAml_1.2.2p\src\foreman.h
fastDNAml_1.2.2p\src\getinput.c
fastDNAml_1.2.2p\src\Makefile.LINUX
fastDNAml_1.2.2p\src\Makefile.SP
fastDNAml_1.2.2p\src\master.c
fastDNAml_1.2.2p\src\print_tree.c
fastDNAml_1.2.2p\src\readKeyValue.c
fastDNAml_1.2.2p\src\send_tree.c
fastDNAml_1.2.2p\src\str_addElementLen.c
fastDNAml_1.2.2p\src\str_readTreeLikelihood.c
fastDNAml_1.2.2p\src\str_util.c
fastDNAml_1.2.2p\src\utilities.c
fastDNAml_1.2.2p\src\wgts_categs.c
fastDNAml_1.2.2p\src\worker.c
fastDNAml_1.2.2p\src\write_tree_string.c
fastDNAml_1.2.2p\src
fastDNAml_1.2.2p\testdata\css0_ip_02x04.ll
fastDNAml_1.2.2p\testdata\mkp4pg
fastDNAml_1.2.2p\testdata\mpi56.bst
fastDNAml_1.2.2p\testdata\mpi56.cpt
fastDNAml_1.2.2p\testdata\mpi56.log
fastDNAml_1.2.2p\testdata\mpi56.mon
fastDNAml_1.2.2p\testdata\mpi56.out
fastDNAml_1.2.2p\testdata\mpi56.pg
fastDNAml_1.2.2p\testdata\mpi56.trf
fastDNAml_1.2.2p\testdata\mpi_test.pbs
fastDNAml_1.2.2p\testdata\pvm_test.pbs
fastDNAml_1.2.2p\testdata\ser_test.pbs
fastDNAml_1.2.2p\testdata\SP_poe_08.cmd
fastDNAml_1.2.2p\testdata\test5.bst
fastDNAml_1.2.2p\testdata\test5.phy
fastDNAml_1.2.2p\testdata\test56.phy
fastDNAml_1.2.2p\testdata\test5B.bst
fastDNAml_1.2.2p\testdata\test5B.phy
fastDNAml_1.2.2p\testdata\test5C.bst
fastDNAml_1.2.2p\testdata\test5C.phy
fastDNAml_1.2.2p\testdata\test5GRT.bst
fastDNAml_1.2.2p\testdata\test5GRT.phy
fastDNAml_1.2.2p\testdata\test5I.bst
fastDNAml_1.2.2p\testdata\test5I.phy
fastDNAml_1.2.2p\testdata\test5I2.bst
fastDNAml_1.2.2p\testdata\test5I2.phy
fastDNAml_1.2.2p\testdata\test5J.bst
fastDNAml_1.2.2p\testdata\test5J.phy
fastDNAml_1.2.2p\testdata\test5R.bst
fastDNAml_1.2.2p\testdata\test5R.phy
fastDNAml_1.2.2p\testdata\test5TF.bst
fastDNAml_1.2.2p\testdata\test5TF.phy
fastDNAml_1.2.2p\testdata\test5U.bst
fastDNAml_1.2.2p\testdata\test5U.phy
fastDNAml_1.2.2p\testdata\test5W.bst
fastDNAml_1.2.2p\testdata\test5W.phy
fastDNAml_1.2.2p\testdata\test5WC.bst
fastDNAml_1.2.2p\testdata\test5WC.phy
fastDNAml_1.2.2p\testdata
fastDNAml_1.2.2p

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