yahmm-master
............\.gitignore
............\.travis.yml
............\CHANGES.txt
............\LICENSE.txt
............\MANIFEST
............\MANIFEST.in
............\README.md
............\examples
............\........\Global Sequence Alignment.ipynb
............\........\ProfileHMM.ipynb
............\........\Tied Edge Example.ipynb
............\........\YAHMM-sklearn Time Test.ipynb
............\........\example.py
............\........\five_prime_splice_site_recognition.ipynb
............\........\infinite_hmm.py
............\........\model.txt
............\........\posterior_probabilities.ipynb
............\........\rainy_sunny_hmm.py
............\........\tied_state_hmm.py
............\requirements.txt
............\setup.py
............\tests
............\.....\__init__.py
............\.....\test_distributions.py
............\.....\test_profile_model.py
............\.....\test_training.py
............\yahmm
............\.....\__init__.py
............\.....\yahmm.pyx