cuda-meme-3.0.12\cuda-meme-3.0.12\esp2png.sh
................\................\.tc\beadstring.xsl
................\................\...\bkg.jpg
................\................\...\block-diagram.xsl
................\................\...\cisml-to-gff.xsl
................\................\...\cisml-to-html.xsl
................\................\...\cisml-to-text.xsl
................\................\...\cisml.css
................\................\...\fasta_db.csv
................\................\...\fimo-to-gff.xsl
................\................\...\fimo-to-html.xsl
................\................\...\fimo-to-text.xsl
................\................\...\fimo.sh
................\................\...\fimo.xsl
................\................\...\fimo_config.xml
................\................\...\glam2.sh
................\................\...\glam2scan.sh
................\................\...\glam2scan_config.xml
................\................\...\glam2_config.xml
................\................\...\gomo.sh
................\................\...\gomo.xsl
................\................\...\gomo_config.xml
................\................\...\gomo_db.csv
................\................\...\help.gif
................\................\...\hmm-text.xsl
................\................\...\logo.js.xsl
................\................\...\mast-to-html.xsl
................\................\...\mast.sh
................\................\...\mast_config.xml
................\................\...\mcast.sh
................\................\...\mcast_config.xml
................\................\...\meme-mast.sh
................\................\...\meme.css.xsl
................\................\...\meme.doc
................\................\...\meme.xsl
................\................\...\meme_config.xml
................\................\...\motif_db.csv
................\................\...\prior1.plib
................\................\...\prior30.plib
................\................\...\template.eps
................\................\...\template.svg
................\................\...\timer.sh
................\................\hostfile
................\................\LICENSE
................\................\Makefile.gpu
................\................\Makefile.mgpu
................\................\README
................\................\src\aa.h
................\................\...\align.h
................\................\...\alignment.c
................\................\...\alignment.h
................\................\...\alphabet.c
................\................\...\alphabet.h
................\................\...\alphtype.c
................\................\...\ama.c
................\................\...\ama_scan.c
................\................\...\ama_scan.h
................\................\...\array-list.c
................\................\...\array-list.h
................\................\...\array.c
................\................\...\array.h
................\................\...\background.c
................\................\...\background.h
................\................\...\banner.c
................\................\...\banner.h
................\................\...\beadstring-xml.h
................\................\...\beadstring.c
................\................\...\beadstring.h
................\................\...\binary-search.c
................\................\...\binary-search.h
................\................\...\branching_search.c
................\................\...\buffer.c
................\................\...\buffer.h
................\................\...\build-hmm.c
................\................\...\build-hmm.h
................\................\...\calculate_p_y.c
................\................\...\calculate_p_y.h
................\................\...\ceqlogo.c
................\................\...\ceqlogo.h
................\................\...\cisml-dtd.h
................\................\...\cisml.c
................\................\...\cisml.h