angle\1.mat
.....\angle.asv
.....\angle.m
.....\angle1.m
.....\boneimg1.PNG
.....\boneimg2.PNG
.....\boneimg3.PNG
.....\example.m
.....\matlab.mat
.....\.edical\bone.jpg
.....\.......\bone1.jpg
.....\.......\bone2.jpg
.....\.......\boneimg1.png
.....\.......\boneimg2.png
.....\.......\boneimg3.png
.....\.......\deform.png
.....\.......\deform1.png
.....\.......\deform2.png
.....\.......\deform3.png
.....\.......\deformed.png
.....\.......\image.asv
.....\.......\image.m
.....\.......\nonrigid_version21b\boneimg1.png
.....\.......\...................\boneimg2.png
.....\.......\...................\boneimg3.png
.....\.......\...................\boneimg4.png
.....\.......\...................\boneimg5.png
.....\.......\...................\boneimg6.png
.....\.......\...................\boneimg7.png
.....\.......\...................\boneimg8.png
.....\.......\...................\boneimg9.png
.....\.......\...................\compile_c_files.m
.....\.......\...................\example.asv
.....\.......\...................\functions\backwards2forwards.m
.....\.......\...................\.........\backwards2forwards_2d_double.c
.....\.......\...................\.........\backwards2forwards_2d_double.m
.....\.......\...................\.........\backwards2forwards_3d_double.c
.....\.......\...................\.........\backwards2forwards_3d_single.c
.....\.......\...................\.........\fminlbfgs.m
.....\.......\...................\.........\image_difference.m
.....\.......\...................\.........\imgaussian.c
.....\.......\...................\.........\imgaussian.m
.....\.......\...................\.........\imresize3d.m
.....\.......\...................\.........\inversegrid.m
.....\.......\...................\.........\make_grid_image.m
.....\.......\...................\.........\make_init_grid.m
.....\.......\...................\.........\maple_penalties_smoothing_2d.mw
.....\.......\...................\.........\maple_penalties_smoothing_3d.mw
.....\.......\...................\.........\maxNumCompThreads.c
.....\.......\...................\.........\maxNumCompThreads.m
.....\.......\...................\.........\mutual_histogram_double.c
.....\.......\...................\.........\mutual_histogram_double.m
.....\.......\...................\.........\mutual_histogram_single.c
.....\.......\...................\.........\penalties_smoothness.m
.....\.......\...................\.........\penalty_matrix.mat
.....\.......\...................\.........\refine_grid.m
.....\.......\...................\.........\showcs3.fig
.....\.......\...................\.........\showcs3.m
.....\.......\...................\.........\squared_difference_double.c
.....\.......\...................\.........\squared_difference_double.m
.....\.......\...................\.........\squared_difference_single.c
.....\.......\...................\.........\strain.m
.....\.......\...................\functions
.....\.......\...................\........._affine\affine_error_3d_double.c
.....\.......\...................\................\affine_error_3d_single.c
.....\.......\...................\................\affine_parameter_scaling.m
.....\.......\...................\................\affine_registration_error.m
.....\.......\...................\................\affine_registration_image.m
.....\.......\...................\................\affine_transform.m
.....\.......\...................\................\affine_transform_2d_double.c
.....\.......\...................\................\affine_transform_2d_double.m
.....\.......\...................\................\affine_transform_3d_double.c
.....\.......\...................\................\affine_transform_3d_single.c
.....\.......\...................\................\image_interpolation.c
.....\.......\...................\................\image_interpolation.h
.....\.......\...................\................\make_transformation_matrix.m
.....\.......\...................\functions_affine
.....\.......\...................\..........nonrigid\bspline_coefficients.m
.....\.......\..................