we developed a toolkit called PriVar, a systematic prioritization pipeline that takes into consideration calling quality of the variants, their predicted functional impact, known connection of the gene to the disease and the number of mutations in a gene, and inference from linkage analysis.

CancerCellPanINDataBinned
.........................\02-Control
.........................\..........\PanINCTL
.........................\..........\........\140_4387_02_d.txt_PQ.csv
.........................\..........\........\144_4185_02t_h.txt_PQ.csv
.........................\..........\........\148_4382_02t_d.txt_PQ.csv
.........................\..........\........\149_4314_02_e.txt_PQ.csv
.........................\..........\........\151_4381_02_g.txt_PQ.csv
.........................\..........\........\154_4384_02_b.txt_PQ.csv
.........................\..........\........\158_4579_02t_f.txt_PQ.csv
.........................\..........\........\160_4580_02t_h.txt_PQ.csv
.........................\..........\........\161_4583_02_a.txt_PQ.csv
.........................\..........\........\162_4561_02t_b.txt_PQ.csv
.........................\..........\........\164_4581_02_d.txt_PQ.csv
.........................\..........\........\172_4389_02t_d.txt_PQ.csv
.........................\..........\........\174_4538_02_f.txt_PQ.csv
.........................\..........\........\175_4387_02t_g.txt_PQ.csv
.........................\..........\........\176_4464_02_h.txt_PQ.csv
.........................\..........\........\177_4541_02t_a.txt_PQ.csv
.........................\..........\........\179_4583_02t_c.txt_PQ.csv
.........................\..........\........\180_4388_02_d.txt_PQ.csv
.........................\..........\........\186_4581_02t_b.txt_PQ.csv
.........................\..........\........\189_4770_02t_e.txt_PQ.csv
.........................\..........\........\190_4464_02_f.txt_PQ.csv
.........................\..........\........\194_4580_02_b.txt_PQ.csv
.........................\..........\........\198_4766_02_f.txt_PQ.csv
.........................\..........\........\199_4389_02t_g.txt_PQ.csv
.........................\..........\........\203_4989_02_c.txt_PQ.csv
.........................\..........\........\206_4579_02_f.txt_PQ.csv
.........................\..........\........\209_4388_02_a.txt_PQ.csv
.........................\..........\........\216_4581_02t_h.txt_PQ.csv
.........................\..........\........\220_4523_02t_d.txt_PQ.csv
.........................\..........\........\222_4581_02_f.txt_PQ.csv
.........................\..........\........\223_4523_02_g.txt_PQ.csv
.........................\..........\........\226_4962_02_b.txt_PQ.csv
.........................\..........\........\232_4583_02_h.txt_PQ.csv
.........................\..........\........\233_4583_02t_a.txt_PQ.csv
.........................\..........\........\235_4580_02_c.txt_PQ.csv
.........................\..........\........\239_4811_02_g.txt_PQ.csv
.........................\..........\........\244_4580_02t_d.txt_PQ.csv
.........................\..........\........\245_4992_02_e.txt_PQ.csv
.........................\..........\........\250_4382_02_b.txt_PQ.csv
.........................\..........\........\252_4770_02_d.txt_PQ.csv
.........................\..........\........\253_4992_02_e.txt_PQ.csv
.........................\..........\........\261_4536_02_e.txt_PQ.csv
.........................\..........\........\264_4387_02_h.txt_PQ.csv
.........................\..........\........\265_4951_02_a.txt_PQ.csv
.........................\..........\........\267_4388_02_c.txt_PQ.csv
.........................\..........\........\272_4382_02_h.txt_PQ.csv
.........................\..........\........\273_4389_02_a.txt_PQ.csv
.........................\..........\........\278_4952_02_f.txt_PQ.csv
.........................\..........\........\279_4464_02_g.txt_PQ.csv
.........................\..........\........\281_4770_02t_a.txt_PQ.csv
.........................\..........\........\283_4578_02_c.txt_PQ.csv
.........................\..........\........\285_4541_02_e.txt_PQ.csv
.........................\..........\........\286_4949_02_f.txt_PQ.csv
.........................\..........\........\290_4536_02t_b.txt_PQ.csv
.........................\..........\........\294_4948_02_f.txt_PQ.csv
.........................\..........\........\295_4580_02_g.

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